Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms

Authors

Shelby J. Barnes, University of Southern California
Raven C. Althouse, University of Southern California
Bianca F. Costa, University of Southern California
Boyan Hu, University of Southern California
Maxim Kovalev, University of Southern California
Timur Kulik, University of Southern California
Yu Tung Lee, University of Southern California
Meredith C. Moore, University of Southern California
Emily Peng, University of Southern California
Jing Yao Pook, University of Southern California
Akshita Sharma, University of Southern California
Celia Wood, University of Southern California
Eric A. Webb, University of Southern California
Hannah Sterling, Roger Williams University
Christoph Aeppli, Bigelow Laboratory for Ocean Sciences
J. Cameron Thrash, University of Southern California

Document Type

Article

Publication Title

Microbiology Resource Announcements

Publication Date

6-1-2023

Abstract

We performed deep metagenomic sequencing on hydrocarbon-degrading marine microcosms designed to experimentally determine the effect of photo-oxidation on oil biodegradation dynamics. Assembly, binning, and dereplication yielded 73 unique metagenome-assembled genomes (MAGs) from 6 phyla, of which 61 are predicted to be over 90% complete.

Volume

12

Issue

6

DOI

10.1128/mra.00210-23

Recommended Citation

Barnes, S., Althouse, R., Costa, B., Hu, B., Kovalev, M., Kulik, T., Lee, Y., Moore, M., Peng, E., Pook, J., Sharma, A., Wood, C., Webb, E., Sterling, H., Aeppli, C., & Thrash, J. (2023). Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms. Microbiology Resource Announcements, 12 (6) https://doi.org/10.1128/mra.00210-23

E-ISSN

2576098X